Researcher
Petra Van Damme
- Keywords:proteomics, bacterial pathogen, riboproteogenomics, proteoforms, host-microbe interaction, genome (re-)annotation, (alternative) translation initiation
- Disciplines:Transcription and translation, Proteomics, Transcriptomics, Interactomics, Infectious diseases
Affiliations
- Department of Biochemistry and microbiology (Department)
Member
From1 Mar 2019 → Today - Department of Biomolecular Medicine (Department)
Member
From1 Oct 2018 → 28 Feb 2019 - Department of Plant Biotechnology and Bioinformatics (Department)
Member
From1 May 2018 → 30 Sep 2018 - Department of Biochemistry (Department)
Member
From1 Feb 2003 → 30 Sep 2018 - Department of Biomedical molecular biology (Department)
Member
From1 Jan 2002 → 31 Aug 2002
Projects
1 - 10 of 10
- Novel mechanisms of inflammation and cell death regulation in autoinflammatory and infectious diseasesFrom1 Jan 2023 → TodayFunding: BOF - projects
- Microarrays for the phenotypic characterization of axenic cultures, bacterial mutants and microbiome communitiesFrom15 Dec 2022 → TodayFunding: BOF - scientific equipment program
- Unraveling the heterogeneous nature of host/pathogen encounters and their role in bacterial pathogenesis.From1 Jan 2021 → TodayFunding: FWO research project (including WEAVE projects)
- Preparative and analytical ultracentrifugation to aid integrative, multi-omics studies.From1 Dec 2020 → 30 Nov 2022Funding: BOF - scientific equipment program
- A MALDI-8020 mass spectrometer for peptide and protein analysis.From1 Dec 2020 → 30 Nov 2022Funding: BOF - scientific equipment program
- Riboproteogenomics of the sORF-encoded Salmonella peptidomeFrom1 Jan 2020 → 31 Dec 2023Funding: FWO research project (including WEAVE projects)
- Proteogenomic-assisted exploration of the molecular mechanisms underlying Salmonella infectionFrom1 Oct 2019 → 31 Mar 2022Funding: BOF - postdoctoral mandates
- Riboproteogenomics in aid of bacterial pathogen/host interaction studiesFrom15 Apr 2019 → 14 Feb 2024Funding: BOF - projects
- PROPHECY: Translational control in infection biology: riboproteogenomics of bacterial pathogensFrom1 Nov 2018 → 31 Oct 2023Funding: H2020-EU.1.1. - EXCELLENT SCIENCE - European Research Council (ERC)
- Special Research Fund Professorship in proteomicsFrom1 Oct 2018 → TodayFunding: BOF - ZAP BOF mandates
Publications
21 - 30 of 38
- Biochemical and cellular analysis of Ogden syndrome reveals downstream Nt-acetylation defects(2015)
Authors: Line M Myklebust, Petra Van Damme, Svein I Støve, Max J Dörfel, Angèle Abboud, Thomas V Kalvik, Cedric Grauffel, Veronique Jonckheere, Yiyang Wu, Jeffrey Swensen, et al.
Pages: 1956 - 1976 - N-terminal acetylome analysis reveals the specificity of Naa50 (Nat5) and suggests a kinetic competition between N-terminal acetyltransferases and methionine aminopeptidases(2015)
Authors: Petra Van Damme, Kristine Hole, Kris Gevaert, Thomas Arnesen
Pages: 2436 - 2446 - An organellar Nα-acetyltransferase, Naa60, acetylates cytosolic N termini of transmembrane proteins and maintains Golgi integrity(2015)
Authors: Henriette Aksnes, Petra Van Damme, Marianne Goris, Kristian K Starheim, Michaël Marie, Svein Isungset Støve, Camilla Hoel, Thomas Vikestad Kalvik, Kristine Hole, Nina Glomnes, et al.
Pages: 1362 - 1374 - Metabolic regulation of N-terminal acetylation in Saccharomyces cerevisiae(2015)Volume: 32
Authors: Sylvia Varland, Petra Van Damme, Jolien Hollebeke, Henriette Aksnes, Kris Gevaert, Thomas Arnesen
Pages: S67 - S67 - OMICS views on protein N-terminal biology(2015)
Authors: Petra Van Damme, Kris Gevaert
Pages: 2383 - 2384 - N-terminal proteomics and ribosome profiling provide a comprehensive view of the alternative translation initiation landscape in mice and men(2014)
Authors: Petra Van Damme, Daria Fijalkowska, Wim Van Criekinge, Gerben Menschaert
Pages: 1245 - 1261 - The proteome under translational control(2014)
Authors: Daria Fijalkowska, Kris Gevaert, Petra Van Damme
Pages: 2647 - 2659 - Dissecting apoptosis the omics way(2013)
Authors: Petra Van Damme
- HPLC-based quantification of in vitro N-terminal acetylation(2013)Series: Methods in Molecular Biology
Authors: Rune H. Evjenth, Petra Van Damme, Kris Gevaert, Thomas Arnesen
Pages: 95 - 102 - In-gel N-acetylation for the quantification of the degree of protein in vivo N-terminal acetylation(2013)Series: Methods in Molecular Biology
Authors: Petra Van Damme, Thomas Arnesen, Bart Ruttens, Kris Gevaert, Sandra B. Hake, Christian J. Janzen
Pages: 115 - 126