Researcher
Pieter-Jan Volders
- Disciplines (Flanders Institute for Biotechnology):Analytical biochemistry, Cell death and senescence, Analysis of next-generation sequence data, General diagnostics
- Disciplines (Ghent University):Structural bioinformatics and computational proteomics, Development of bioinformatics software, tools and databases, Computational transcriptomics and epigenomics
Affiliations
- Department of Biomolecular Medicine (Department)
Member
From1 Oct 2018 → Today - Martens Lab (Research group)
Member
From1 Jan 2017 → 11 Feb 2022 - Department of Biochemistry (Department)
Member
From1 Oct 2015 → 30 Sep 2018 - Department of Pediatrics and medical genetics (Department)
Member
From1 Oct 2011 → 25 Sep 2016
Projects
1 - 2 of 2
- Development of a laboratory toolbox to study human circular RNAsFrom1 Oct 2021 → TodayFunding: BOF - projects
- The first genome-wide maps of the micropeptidome validated through large-scale reprocessing of public proteomics dataFrom1 Oct 2020 → 13 Feb 2022Funding: FWO senior postdoctoral fellowship
Publications
11 - 20 of 21
- Noncoding after all : biases in proteomics data do not explain observed absence of lncRNA translation products(2017)
Authors: Kenneth Verheggen, Pieter-Jan Volders, Pieter Mestdagh, Gerben Menschaert, Petra Van Damme, Kris Gevaert, Lennart Martens, Jo Vandesompele
Pages: 2508 - 2515 - miSTAR : miRNA target prediction through modeling quantitative and qualitative miRNA binding site information in a stacked model structure(2017)
Authors: Gert Van Peer, Ayla De Paepe, Michiel Stock, Jasper Anckaert, Pieter-Jan Volders, Jo Vandesompele, Bernard De Baets, Willem Waegeman
- Exploring lncRNAs in cancer : tools for discovery and characterization of cancer associated lncRNAs(2015)
Authors: Pieter-Jan Volders
- The first lncRNA landscape of major genetic T-ALL subsets and guilt-by-association analysis for ETP-ALL specific lncRNAs(2014)Volume: 99
Authors: Annelynn Wallaert, Kaat Durinck, Wouter Van Loocke, Pieter-Jan Volders, Inge Van de Walle, Yves Benoit, Bruce Poppe, Jo Vandesompele, Tom Taghon, Jean Soulier, et al.
Pages: 2 - 3 - The NOTCH1 driven long non-coding RNA repertoire in T-cell acute lymphoblastic leukemia(2014)Volume: 124
Authors: Annelynn Wallaert, Kaat Durinck, Pieter Rondou, Inge Van de Walle, Wouter Vanloocke, Pieter-Jan Volders, Suzanne Vanhauwaert, Ellen Geerdens, Maté Ongenaert, Nadine Van Roy, et al.
Number of pages: 1 - Expanding the TLX1-regulome in T cell acute lymphoblastic leukemia towards long non-coding RNAs(2013)Volume: 122
Authors: Kaat Durinck, Joni Van der Meulen, Maté Ongenaert, Pieter-Jan Volders, Annelynn Wallaert, Nadine Van Roy, Yves Benoit, Bruce Poppe, Pieter Mestdagh, Jo Vandesompele, et al.
Number of pages: 1 - PROKAR‐SEQ: an analysis and visualization framework for next‐generation sequencing based quantification of prokaryotic communities(2011)
Authors: Joachim De Schrijver, Pieter-Jan Volders, Frederiek-Maarten Kerckhof, Dagmar Obbels, Elie Verleyen, Wim Vyverman, Tim De Meyer, Wim Van Criekinge
Pages: 47 - 47 - ViVar: a comprehensive platform for the analysis and visualization of structural genomic variation
Authors: Tom Sante, Sarah Vergult, Pieter-Jan Volders, Wigard P Kloosterman, Geert Trooskens, Annelies Dheedene
- CIRCprimerXL : convenient and high-throughput PCR primer design for circular RNA quantification
Authors: Marieke Vromman, Jasper Anckaert, Pieter-Jan Volders
- Closing the circle : current state and perspectives of circular RNA databases
Authors: Marieke Vromman, Pieter-Jan Volders
Pages: 288 - 297