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Organisation
Martens Lab
Research Group
Main organisation:VIB-UGent Center for Medical Biotechnology
Lifecycle:1 Jan 2017 → Today
Organisation profile:Applying Machine Learning to high-throughput data, development of novel, advanced data processing and interpretation algorithms that are driven by artificial intelligence.
Keywords:Biochemistry, Proteins, Virology, Vaccines, Molecular diagostics, hepatology
Disciplines:Biochemistry and metabolism, Molecular and cell biology, Bioinformatics and computational biology, Diagnostics
Current researchers
1 - 10 of 22 results
- Lennart Martens (Responsible)
- Sakina Bombaywala (Member)
- Robbin Bouwmeester (Member)
- Toon Callens (Member)
- Tine Claeys (Member)
- Arthur Declercq (Member)
- Sven Degroeve (Member)
- Nina Demeulemeester (Member)
- Robbe Devreese (Member)
- Ralf Gabriels (Member)
Projects
1 - 10 of 12
- Prokaryote proteomics at high temperature for single cells.From1 Jan 2024 → TodayFunding: Other EU initiatives out of framework
- Strengthening Environmental Surveillance to Advance Public Health ActionFrom1 Jul 2023 → TodayFunding: Other EU initiatives out of framework
- Immunopeptidomics-based Development of Next-Generation Bacterial mRNA Vaccines (BAXERNA).From1 Jul 2023 → TodayFunding: Other EU initiatives out of framework
- VIB Grant for Martens Lab_Period:2022-01-01-2026-12-31From1 Jan 2022 → TodayFunding: FRI - Project driven research
- BE2021-COMMUNITYLED (bevat project 2021-3DBioinfo + 2021-PLANTS + 2021-GALAXY + 2021-PROTEOMICS + 2021-IDPTools)From1 Jun 2021 → 31 May 2023Funding: EMBL
- Computational Proteomics Training European Innovative Network’ — ‘PROTrEIN’ - (Marie Sklodowska Curie Innovative Training networks - ITN)From1 Jan 2021 → TodayFunding: HORIZON.1.2 - Marie Skłodowska-Curie-actions (MSCA)
- European Proteomics Infrastructure Consortium providing Access’ — ‘EPIC-XS’From1 Jan 2019 → 31 Dec 2022Funding: Other EU initiatives out of framework
- Extending open proteomics data analysis pipelines in the cloud: Additional tools and focus on scalability, supporting the dramatic growth of public proteomics dataFrom1 Aug 2018 → 31 Jul 2019Funding: EMBL
- Crowd-sourcing the annotation of public proteomics datasets to improve data reusabilityFrom1 Jun 2018 → 31 May 2019Funding: EMBL
- A galaxy based multiomic informatics hub for cancer researchFrom1 May 2017 → 30 Apr 2019Funding: Foreign foundations, funds with scientific view
Publications
1 - 10 of 115
- The RNA Atlas expands the catalog of human non-coding RNAs.(2021)
Authors: Pieter-Jan Volders, Robrecht Cannoodt, Katrien Vanderheyden, Yvan Saeys
Pages: 1453-1465 - Unipept Visualizations: An Interactive Visualization Library For Biological Data.(2022)
Authors: Pieter Verschaffelt, James Collier, Alexander Botzki, Lennart Martens, Bart Mesuere
Pages: 562-563 - Quality control in mass spectrometry-based proteomics(2018)
Authors: Francis Impens, An Staes, Evy Timmerman, Lennart Martens
Pages: 697-711 - Proteomics Standards Initiative's ProForma 2.0: Unifying the Encoding of Proteoforms and Peptidoforms.(2022)
Authors: Tim Van Den Bossche, Ralf Gabriels
Pages: 1189-1195 - Unbiased Protein Association Study on the Public Human Proteome Reveals Biological Connections between Co-Occurring Protein Pairs(2017)
Authors: Surya Gupta, Kenneth Verheggen, Jan Tavernier, Lennart Martens
Pages: 2204-2212 - FAVA: High-quality functional association networks inferred from scRNA-seq and proteomics data.(2024)
Authors: Robbin Bouwmeester, Lennart Martens
Pages: e-pub - The RNA landscape of the human placenta in health and disease.(2021)
Authors: Pieter-Jan Volders, Lennart Martens
Pages: 2639 - Challenges and promise at the interface of metaproteomics and genomics: an overview of recent progress in metaproteogenomic data analysis(2019)
Authors: Tim Van Den Bossche, Lennart Martens
Pages: 375-390 - Extracellular vesicles in patients in the acute phase of psychosis and after clinical improvement: an explorative study.(2020)
Authors: Tim Van Den Bossche
Pages: e9714 - Universal Spectrum Identifier for mass spectra.(2021)
Authors: Tim Van Den Bossche, Ralf Gabriels
Pages: 768-770