Researcher
Tim De Meyer
- Keywords:epigenomics, aging, telomere biology, transcriptomics, allele-specific expression
- Disciplines:Structural bioinformatics and computational proteomics, Bioinformatics of disease, Computational transcriptomics and epigenomics, Vascular diseases, Biogerontology
Affiliations
- Department of Data analysis and mathematical modelling (Department)
Member
From1 Jan 2018 → Today - Department of Mathematical Modelling, Statistics and Bio-informatics (Department)
Member
From1 Feb 2011 → 31 Dec 2017 - Department of Molecular biotechnology (Department)
Member
From1 Oct 2004 → 30 Sep 2012
Projects
1 - 9 of 9
- A bioinformatic toolbox for the analysis and optimization of a high-throughput deep mutational scanning assay: development and case-studyFrom1 Nov 2020 → TodayFunding: FWO fellowships
- GRAY U+2013 Ghent University Research for U+201CAging YoungU+201D.From1 Jan 2020 → TodayFunding: BOF - research organisations
- The development of a cost-efficient eQTL scanning strategy to unravel the broad transcriptional response of a generalist pest to novel hosts.From1 Jan 2020 → TodayFunding: FWO research project
- In-depth study of structure/activity relations of the glucocorticoid receptor and its ligands via an extreme mutation scan.From1 Nov 2019 → TodayFunding: FWO Strategic Basic Research Grant
- MAGE U+2013 Modelling of Allelic Gene Expression in health and disease.From1 Oct 2019 → TodayFunding: BOF - projects
- Bioinformatics for a high-throughput deep mutational scanning protein-protein interaction assay: turning a prototype into a precision medicine toolboxFrom1 Oct 2019 → 31 Oct 2020Funding: BOF - doctoral mandates
- Epigenetic control of rice immunity hub genesFrom1 Jan 2017 → 31 Dec 2020Funding: FWO research project
- Epigenomics: short term adaptation with long term consequencesFrom1 Feb 2011 → 31 Jan 2021Funding: BOF - ZAP BOF mandates
- Bioinformatics: from nucleotids to networks (N2N)From1 May 2010 → 30 Apr 2017Funding: BOF - Other initiatives
Publications
1 - 10 of 115
- Dehydroascorbate induces plant resistance in rice against rootU+2010knot nematode Meloidogyne graminicola(2022)
Authors: Satish Chavan, Jonas De Kesel, Willem Desmedt, Eva Degroote, Richard Raj Singh, Giang Thanh Nguyen Thi, Kristof Demeestere, Tim De Meyer, Tina Kyndt
Pages: 1303 - 1319 - Spatiotemporal expression profile of novel and known small RNAs throughout rice plant development focussing on seed tissues(2022)
Authors: Aniko Meijer, Tim De Meyer, Klaas Vandepoele, Tina Kyndt
- Genome-wide shifts in histone modifications at early stage of rice infection with Meloidogyne graminicola(2021)
Authors: Mohammad Atighi Quchan Atigh, Bruno Verstraeten, Tim De Meyer, Tina Kyndt
Pages: 440 - 455 - DNA methylation regulates transcription factor-specific neurodevelopmental but not sexually dimorphic gene expression dynamics in zebra finch telencephalon(2021)
Authors: Jolien Diddens, Louis Coussement, Carolina Frankl-Vilches, Gaurav Majumdar, Sandra Steyaert, Sita M. Ter Haar, Jeroen Galle, Ellen De Meester, Sarah De Keulenaer, Wim Van Criekinge, et al.
- Chitin in strawberry cultivation : foliar growth and defense response promotion, but reduced fruit yield and disease resistance by nutrient imbalances(2021)
Authors: Caroline De Tender, Bart Vandecasteele, Bruno Verstraeten, Sarah Ommeslag, Tim De Meyer, Jill De Visscher, Peter Dawyndt, Lieven Clement, Tina Kyndt, Jane Debode
Pages: 227 - 239 - A hypomorphic mutant of PHD domain protein male meiocytes death 1(2021)
Authors: Bing Liu, Chunlian Jin, Nico De Storme, Sébastien Schotte, Cédric Schindfessel, Tim De Meyer, Danny Geelen
- The RNA Atlas expands the catalog of human non-coding RNAs (June, 10.1038/s41587-021-00936-1, 2021)(2021)
Authors: Lucia Lorenzi, Hua-Sheng Chiu, Francisco Avila Cobos, Stephen Gross, Pieter-Jan Volders, Robrecht Cannoodt, Justine Nuytens, Katrien Vanderheyden, Jasper Anckaert, Steve Lefever, et al.
Pages: 1467 - 1467 - The genome of the extremophile Artemia provides insight into strategies to cope with extreme environments(2021)
Authors: Stephanie De Vos, Stephane Rombauts, Louis Coussement, Wannes Dermauw, Marnik Vuylsteke, Patrick Sorgeloos, James S. Clegg, Ziro Nambu, Filip Van Nieuwerburgh, Parisa Norouzitallab, et al.
- Non-coding RNAs in the interaction between rice and Meloidogyne graminicola(2021)
Authors: Bruno Verstraeten, Mohammad Reza Atighi Quchan Atigh, Virginia Ruiz-Ferrer, Carolina Escobar, Tim De Meyer, Tina Kyndt
- Identification of DNA methylation markers for early detection of CRC indicates a role for nervous system-related genes in CRC(2021)
Authors: Glenn Rademakers, Maartje Massen, Alexander Koch, Muriel X. Draht, Nikkie Buekers, Kim A. D. Wouters, Nathalie Vaes, Tim De Meyer, Beatriz Carvalho, Gerrit A. Meijer, et al.