Researcher
Annelies Haegeman
- Disciplines:Analysis of next-generation sequence data
Affiliations
- Plant Sciences (Research unit)
Member
From1 Jan 2019 → Today - Growth and Development (Division)
Member
From1 May 2013 → 31 Dec 2018
Projects
1 - 10 of 12
- Assessing the risk of whitefly transmitted viruses for Belgian cropsFrom1 Jun 2022 → Today
- Inzicht in het persisterend karakter van Samonella Infantis in de braadkippensector in België als basis voor het doorbreken van contaminatiecycliFrom1 Feb 2022 → Today
- Phytosanitary status and epidemiology of beech leaf disease in BelgiumFrom1 Jun 2021 → Today
- Integrated management of the onion thrips, Thrips tabaci in open field vegetablesFrom1 Oct 2020 → Today
- Plant Health Bioinformatics NetworkFrom1 Sep 2019 → 28 Feb 2022
- Phytosanitary risks of newly introduced cropsFrom1 Jul 2019 → 31 Mar 2022
- Reduction of Campylobacter in broiler flocks: identification of risk factors, evaluation of increased biosecurity measures and the protective effect of the microbiota of Campylobacter free flocksFrom15 Jan 2018 → 31 Jan 2022
- Detection, identification and entry routes of Verticillium on hopFrom1 Jan 2018 → 31 Dec 2019
- Unravelling the Little Cherry disease complex at European scale to improve transnational diagnostics and management of the diseaseFrom1 May 2017 → 30 Apr 2019
- Introduction of pathogens by pollen, bees and bee products: risk identification in order to the protect plant and pollinatorFrom1 Mar 2016 → 28 Feb 2019
Publications
1 - 10 of 87
- Guidelines for the reliable use of high throughput sequencing technologies to detect plant pathogens and pests(2022)
Authors: Sebastien Massart, Ian Adams, Maher Al Rwahnih, Steve Baeyen, Guillaume J Bilodeau, Arnaud G. Blouin, Neil Boonham, Thierry Candresse, Anne Chandelier, Kris De Jonghe, et al.
Pages: 1-34 - Tomato fruit blotch virus: an update on epidemiology, cytopathology and molecular features.(2022)
Authors: Antonio Tiberini, Ahmed Ben Hafsa, Alice Kazuko, Andrea Gentili, Anna Taglienti, Annelies Haegeman, Ariana Manglli, Ayoub Maachi, Covadonga Torre, Denis Kutnjak, et al.
- Exploring the microbial composition of Holstein Friesian and Belgian Blue colostrum in relation to the transfer of passive immunity(2022)
Authors: Ilke Van Hese, Karen Goossens, Bart Ampe, Annelies Haegeman, Geert Opsomer
Pages: 7623-7641 - Facilitating the adoption of high-throughput sequencing technologies as a plant pest diagnostic test in laboratories: A step-by- step description(2022)
Authors: Benedicte S.M. Lebas, Ian Adams, Maher Al Rwahnih, Steve Baeyen, Guillaume J Bilodeau, Arnaud G. Blouin, Neil Boonham, Thierry Candresse, Anne Chandelier, Kris De Jonghe, et al.
Pages: 394-418 - Semi-artificial datasets as a resource for validation of bioinformatics pipelines for plant virus detection(2021)
Authors: Lucie Tamisier, Annelies Haegeman, Yoika Foucart, Nicolas Fouillien, Maher Al Rwahnih, Nihal Buzkan, Thierry Candresse, Michela Chiumenti, Kris De Jonghe, Marie Lefebvre, et al.
Pages: 1-15 - Unravelling hybridization in Phytophthora using phylogenomics and genome size estimation(2021)
Authors: Kris Van Poucke, Annelies Haegeman, Thomas Goedefroit, Fran Focquet, Leen Leus, Marília Horta Jung, Corina Nave, Miguel Angel Redondo, Claude Husson, Kaloyan Kostov, et al.
- Detection of Macrobenthos Species With Metabarcoding Is Consistent in Bulk DNA but Dependent on Body Size and Sclerotization in eDNA From the Ethanol Preservative(2021)
Authors: Sofie Derycke, Sara Maes, Laure Van den Bulcke, Joran Vanhollebeke, Jan Wittoeck, Hans Hillewaert, Bart Ampe, Annelies Haegeman, Kristian Hostens, Annelies De Backer
- Reassessment of the Columnea latent viroid (CLVd) Taxonomic Classification(2021)
Authors: Parichate Tangkanchanapas, Annelies Haegeman, Monica Höfte, Kris De Jonghe
Pages: 1-24 - Amplicon sequencing, a new approach to study Columnea latent viroid (CLVd) quasispecies populations(2021)
Authors: Parichate Tangkanchanapas, Annelies Haegeman, Tom Ruttink, Monica Höfte, Kris De Jonghe
- Population structure of Verticillium isolates from Belgian hops(2021)
Authors: Kurt Heungens, Jane Debode, Kris Van Poucke, Sebastjan Radišek, Lies Willaert, Annelies Haegeman
Linked dataset
1 - 6 of 6
- Training materials on detection of plant viruses through high throughput sequencing - Accompanying information Kutnjak et al., Microorganisms, 2021,9, 841. (Other)
- Supplementary information accompanying the paper "Nematodes facilitate bacterial-mediated biogeochemical processes in marine sediments: a meta-transcriptomics approach" (Other)
- Semi-artificial datasets as a resource for validation of bioinformatics pipelines for plant virus detection (Other)
- 12S metabarcoding reference data from the Research Institute for Nature and Forest (INBO) (Other)
- Data from: Unravelling hybridization in Phytophthora using phylogenomics and genome size estimation (Other)
- GBS_Phytophthora_Release1.0.0 (Creator)