Researcher
Annelies Haegeman
- Disciplines:Analysis of next-generation sequence data
Affiliations
- Plant Sciences (Research unit)
Responsible
From1 Jan 2019 → Today - Growth and Development (Division)
Responsible
From1 May 2013 → 31 Dec 2018
Projects
1 - 9 of 9
- Linking soil biodiversity and ecosystem functions and services in different land uses: from the identification of drivers, pressures and climate change resilience to their economic valuationFrom1 Sep 2023 → Today
- Phytosanitary status and epidemiology of beech leaf disease in BelgiumFrom1 Jun 2021 → 31 May 2023
- Integrated management of the onion thrips, Thrips tabaci in open field vegetablesFrom1 Oct 2020 → Today
- Plant Health Bioinformatics NetworkFrom1 Sep 2019 → 28 Feb 2022
- Reduction of Campylobacter in broiler flocks: identification of risk factors, evaluation of increased biosecurity measures and the protective effect of the microbiota of Campylobacter free flocksFrom15 Jan 2018 → 31 Jan 2022
- Detection, identification and entry routes of Verticillium on hopFrom1 Jan 2018 → 31 Dec 2019
- Unravelling the Little Cherry disease complex at European scale to improve transnational diagnostics and management of the diseaseFrom1 May 2017 → 30 Apr 2019
- Introduction of pathogens by pollen, bees and bee products: risk identification in order to the protect plant and pollinatorFrom1 Mar 2016 → 28 Feb 2019
- Genetic control of plantarchitecture in two representative crops as basis for yield enhancement through improved culture techniques and efficient breedingFrom1 Oct 2009 → 30 Jun 2014
Publications
1 - 10 of 72
- The effect of maternal supply of rumen-protected protein to Holstein Friesian cows during the dry period on the transfer of passive immunity and colostral microbial composition(2023)
Authors: Ilke Van Hese, Leen Vandaele, Annelies Haegeman, G. Opsomer
Pages: 8723-8745 - Detection of single nucleotide polymorphisms in virus genomes assembled from high-throughput sequencing data: large-scale performance testing of sequence analysis strategies(2023)
Authors: Johan Rollin, Rachelle Bester, Yves Brosteaux, Kadriye Caglayan, Kris De Jonghe, A. Eichmeier, Yoika Foucart, Annelies Haegeman, Igor Koloniuk, Petr Kominek, et al.
Pages: 1-25 - Using environmental DNA metabarcoding to monitor fish communities in small rivers and large brooks: Insights on the spatial scale of information(2023)
Authors: Charlotte Van Driessche, Teun Everts, Sabrina Neyrinck, David Halfmaerten, Annelies Haegeman, Tom Ruttink, Dries Bonte, Rein Brys
- Identification and characterization of CYP71 subclade cytochrome P450 enzymes involved in the biosynthesis of bitterness compounds in Cichorium intybus.(2023)
Authors: Charlotte De Bruyn, Tom Ruttink, Elia Lacchini, Stephane Rombauts, Annelies Haegeman, Ellen De Keyser, Sandrien Desmet, Thomas B Jacobs, Tom Eeckhaut, Alain Goossens, et al.
- Exploring practical applications of metabarcoding with MinION to support the surveillance of the phloem bacteria ‘Candidatus Phytoplasma’ and ‘Candidatus Liberibacter’(2023)
Authors: Ellen Everaert, Kris De Jonghe, Dieter Slos, Maaike Heyneman, Annelies Haegeman
Pages: 141-142 - Phylogeography and population structure of the global, wide host-range hybrid pathogen Phytophthora × cambivora(2023)
Authors: Martin S Mullett, Kris Van Poucke, Annelies Haegeman, Fran Focquet, Nicholas C Cauldron, Brian J Knaus, Marília Horta Jung, Koji Kageyama, Ayaka Hieno, Hayato Masuja, et al.
- Guidelines for the reliable use of high throughput sequencing technologies to detect plant pathogens and pests(2022)
Authors: Sebastien Massart, Ian Adams, Maher Al Rwahnih, Steve Baeyen, Guillaume J Bilodeau, Arnaud G. Blouin, Neil Boonham, Thierry Candresse, Anne Chandelier, Kris De Jonghe, et al.
Pages: 1-34 - Tomato fruit blotch virus: an update on epidemiology, cytopathology and molecular features.(2022)
Authors: Antonio Tiberini, Ahmed Ben Hafsa, Alice Kazuko, Andrea Gentili, Anna Taglienti, Annelies Haegeman, Ariana Manglli, Ayoub Maachi, Covadonga Torre, Denis Kutnjak, et al.
- Facilitating the adoption of high-throughput sequencing technologies as a plant pest diagnostic test in laboratories: A step-by- step description(2022)
Authors: Benedicte S.M. Lebas, Ian Adams, Maher Al Rwahnih, Steve Baeyen, Guillaume J Bilodeau, Arnaud G. Blouin, Neil Boonham, Thierry Candresse, Anne Chandelier, Kris De Jonghe, et al.
Pages: 394-418 - Unravelling hybridization in Phytophthora using phylogenomics and genome size estimation(2021)
Authors: Kris Van Poucke, Annelies Haegeman, Thomas Goedefroit, Fran Focquet, Leen Leus, Marília Horta Jung, Corina Nave, Miguel Angel Redondo, Claude Husson, Kaloyan Kostov, et al.
Linked dataset
1 - 6 of 6
- Data from: Using environmental DNA metabarcoding to monitor fish communities in small rivers and large brooks: Insights on the spatial scale of information (Creator)
- Training materials on detection of plant viruses through high throughput sequencing - Accompanying information Kutnjak et al., Microorganisms, 2021,9, 841. (Other)
- Supplementary information accompanying the paper "Nematodes facilitate bacterial-mediated biogeochemical processes in marine sediments: a meta-transcriptomics approach" (Other)
- 12S metabarcoding reference data from the Research Institute for Nature and Forest (INBO) (Other)
- Data from: Unravelling hybridization in Phytophthora using phylogenomics and genome size estimation (Creator)
- GBS_Phytophthora_Release1.0.0 (Creator)