Orthology guided transcriptome assembly of Italian ryegrass and meadow fescue (update data set) Instituut voor Landbouw-, Visserij- en Voedingsonderzoek
Yates Steven, Książczyk Tomasz, Bartos Jan, Studer Bruno, Abrouk Michael, Isabel Roldán-Ruiz, Zwierzykowski Zbigniew, Rey Elodie, Doležel Jaroslav, Tom Ruttink, Stepan Stoces
Transcriptome sequencing was performed on ten samples (corresponding to six genotypes) of Festuca pratensis and ten samples (corresponding to six genotypes) of Lolium multiflorum and fourteen samples of Lolium perenne (corresponding to fourteen genotypes). Using the OGA approach, 18,952 non-redundant F. pratensis transcripts were assembled by combining the contigs of all six genotypes based on orthology with the Brachypodium distachyon proteome. Similarly, 19,036 non-redundant L. multiflorum transcripts were assembled and annotated. In total, 17,455 orthologous transcripts were shared between ...