Publicaties
Reverse taxonomy applied to the Brachionus calyciflorus cryptic species complex: Morphometric analysis confirms species delimitations revealed by molecular phylogenetic analysis and allows the (re) description of four species KU Leuven
Exploring HIV-1 transmission dynamics by combining phylogenetic analysis and infection timing Instituut voor Tropische Geneeskunde Universiteit Gent Vrije Universiteit Brussel KU Leuven
HIV-1 pol sequences obtained through baseline drug resistance testing of patients newly diagnosed between 2013 and 2017 were analyzed for genetic similarity. For 927 patients the information on genetic similarity was combined with demographic data and with information on the recency of infection. Overall, 48.3% of the patients were genetically linked with 11.4% belonging to a pair and 36.9% involved in a cluster of >= 3 members. The ...
Phylogenetic analysis of Hepatitis C virus infections in a large Belgian cohort using next-generation sequencing of full-length genomes Instituut voor Tropische Geneeskunde KU Leuven Universiteit Hasselt
A comprehensive phylogenetic analysis of the MAP4K family in the green lineage Universiteit Gent Vlaams Instituut voor Biotechnologie
Phylogenetic analysis of feline immunodeficiency virus strains from naturally infected cats in Belgium and The Netherlands Universiteit Gent
Phylogenetic analysis of protease and transmembrane region of HIV type 1 group O Instituut voor Tropische Geneeskunde
Phylogenetic analysis of the env gene of HIV-1 isolates taking into account individual nucleotide substitution rates Instituut voor Tropische Geneeskunde
Phylogenetic analysis of the Belgian HIV-1 epidemic reveals that local transmission is almost exclusively driven by men having sex with men despite presence of large African migrant communities Instituut voor Tropische Geneeskunde Vrije Universiteit Brussel Universiteit Gent KU Leuven
To improve insight in the drivers of local HIV-1 transmission in Belgium, phylogenetic, demographic, epidemiological and laboratory data from patients newly diagnosed between 2013 and 2015 were combined and analyzed. Characteristics of clustered patients, paired patients and patients on isolated branches in the phylogenetic tree were compared. The results revealed an overall high level of clustering despite the short time frame of sampling, ...