Researcher
Yvan Saeys
- Keywords (Ghent University):machine learning
- Disciplines (Flanders Institute for Biotechnology):Analysis of next-generation sequence data, Adaptive immunology, Bacteriology
- Disciplines (Ghent University):Machine learning and decision making, Health informatics, Single-cell data analysis, Data mining, Computational biomodelling and machine learning, Bio-informatics, Computer science
- See also: Yvan Saeys (Flanders Institute for Biotechnology)
Affiliations
- Department of Applied Mathematics, Computer Science and Statistics (Department)
Member
From1 Feb 2017 → Today - Saeys Lab (Research group)
Responsible
From1 Jan 2017 → Today - Department of Internal medicine (Department)
Member
From1 Oct 2013 → 31 Jan 2017 - Department of Plant Biotechnology and Bioinformatics (Department)
Member
From15 Jan 2001 → 30 Sep 2013
Projects
1 - 10 of 38
- Single-cell SPACE, the next frontierFrom1 Jan 2024 → TodayFunding: BOF - projects
- Computational cytometry techniques for clinical applicationsFrom1 Oct 2022 → TodayFunding: FWO senior postdoctoral fellowship
- SpatialConnect: linking tissue biology to the new era of single-cell spatial transcriptomicsFrom1 May 2022 → TodayFunding: FWO Medium Size Research Infrastructure
- Cell-cell cOmmuNicaTion As a driver of Cancer cell state identiTy - Decoding the impact of cell-cell communications on the identity of tumor states in skin cancersFrom1 Jan 2022 → TodayFunding: FWO EOS
- Interpretable models for integrative single-cell spatial transcriptomicsFrom1 Nov 2021 → TodayFunding: FWO fellowships
- Aligning patient specific cell development trajectories.From1 Nov 2021 → TodayFunding: FWO Strategic Basic Research Grant
- Understanding the role of nuclear receptor HNF4a in sepsis and unravel the mechanisms of its loss-of-function in relation to PPARa failure.From1 Nov 2021 → TodayFunding: FWO fellowships
- Clinical applications of computational cytometryFrom1 Oct 2021 → TodayFunding: BOF - postdoctoral mandates
- Modelling intercellular communication in time and spaceFrom1 Oct 2021 → TodayFunding: BOF - doctoral mandates
- Understanding the immunological basis of persistent airway obstruction in asthmaFrom1 Jan 2021 → TodayFunding: BOF - Methusalem
Publications
31 - 40 of 226
- Deterministic scRNA-seq captures variation in intestinal crypt and organoid composition(2022)
Authors: Johannes Bues, Marjan Biocanin, Joern Pezoldt, Riccardo Dainese, Antonius Chrisnandy, Saba Rezakhani, Wouter Saelens, Vincent Gardeux, Revant Gupta, Rita Sarkis, et al.
Pages: 323 - 330 - CD8 memory precursor cell generation is a continuous process(2022)
Authors: Helena Todorov, Margaux Prieux, Daphne Laubreton, Matteo Bouvier, Shaoying Wang, Simon de Bernard, Christophe Arpin, Wouter Saelens, Arnaud Bonnaffoux, Olivier Gandrillon, et al.
- CARD14 signalling ensures cell survival and cancer associated gene expression in prostate cancer cells(2022)
Authors: Domien Vanneste, Yasmine Driege, Marieke Carels, Elien Van Nuffel, Pieter De Bleser, Yvan Saeys, Rudi Beyaert, Inna Afonina
- A study on the calibration of fingerprint classifiers(2021)
Authors: Daniel Peralta Cámara, Lin Tang, Maxim Lippeveld, Yvan Saeys
Pages: 698 - 704 - Stabilization of human whole blood samples for multicenter and retrospective immunophenotyping studies(2021)
Authors: Paulina Rybakowska, Catalina Burbano, Sofie Van Gassen, Nieves Varela, Rocio Aguilar-Quesada, Yvan Saeys, Marta E. Alarcon-Riquelme, Concepcion Maranon
Pages: 524 - 537 - OTULIN maintains skin homeostasis by controlling keratinocyte death and stem cell identity(2021)
Authors: Esther Hoste, Kim Lecomte, Karl Annusver, Niels Vandamme, Sophia Maschalidi, Lien Verboom, Hanna-Kaisa Vikkula, Mozes Sze, Lisette Van Hove, Kevin Verstaen, et al.
- Recent advances in trajectory inference from single-cell omics data(2021)
Authors: Louise Deconinck, Wouter Saelens, Bart Deplancke, Yvan Saeys
- The RNA Atlas expands the catalog of human non-coding RNAs (June, 10.1038/s41587-021-00936-1, 2021)(2021)
Authors: Lucia Lorenzi, Hua-Sheng Chiu, Francisco Avila Cobos, Stephen Gross, Justine Nuytens, Katrien Vanderheyden, Aidan Tay, Eric J. de Bony, Fien Gysens, Marieke Vromman, et al.
Pages: 1467 - 1467 - Graph approximations to geodesics on metric graphs(2021)
Authors: Robin Vandaele, Yvan Saeys, Tijl De Bie
Pages: 7328 - 7334 - Stable topological signatures for metric trees through graph approximations(2021)
Authors: Robin Vandaele, Bastian Rieck, Yvan Saeys, Tijl De Bie
Pages: 85 - 92