Researcher
Yvan Saeys
- Keywords (Ghent University):machine learning
- Disciplines (Flanders Institute for Biotechnology):Analysis of next-generation sequence data, Adaptive immunology, Bacteriology
- Disciplines (Ghent University):Machine learning and decision making, Health informatics, Single-cell data analysis, Data mining, Computational biomodelling and machine learning, Bio-informatics, Computer science
- See also: Yvan Saeys (Flanders Institute for Biotechnology)
Affiliations
- Department of Applied Mathematics, Computer Science and Statistics (Department)
Member
From1 Feb 2017 → Today - Saeys Lab (Research group)
Responsible
From1 Jan 2017 → Today - Department of Internal medicine (Department)
Member
From1 Oct 2013 → 31 Jan 2017 - Department of Plant Biotechnology and Bioinformatics (Department)
Member
From15 Jan 2001 → 30 Sep 2013
Projects
1 - 10 of 38
- Single-cell SPACE, the next frontierFrom1 Jan 2024 → TodayFunding: BOF - projects
- Computational cytometry techniques for clinical applicationsFrom1 Oct 2022 → TodayFunding: FWO senior postdoctoral fellowship
- SpatialConnect: linking tissue biology to the new era of single-cell spatial transcriptomicsFrom1 May 2022 → TodayFunding: FWO Medium Size Research Infrastructure
- Cell-cell cOmmuNicaTion As a driver of Cancer cell state identiTy - Decoding the impact of cell-cell communications on the identity of tumor states in skin cancersFrom1 Jan 2022 → TodayFunding: FWO EOS
- Interpretable models for integrative single-cell spatial transcriptomicsFrom1 Nov 2021 → TodayFunding: FWO fellowships
- Aligning patient specific cell development trajectories.From1 Nov 2021 → TodayFunding: FWO Strategic Basic Research Grant
- Understanding the role of nuclear receptor HNF4a in sepsis and unravel the mechanisms of its loss-of-function in relation to PPARa failure.From1 Nov 2021 → TodayFunding: FWO fellowships
- Clinical applications of computational cytometryFrom1 Oct 2021 → TodayFunding: BOF - postdoctoral mandates
- Modelling intercellular communication in time and spaceFrom1 Oct 2021 → TodayFunding: BOF - doctoral mandates
- Understanding the immunological basis of persistent airway obstruction in asthmaFrom1 Jan 2021 → TodayFunding: BOF - Methusalem
Publications
131 - 140 of 226
- The checkpoint for agonist selection precedes conventional selection in human thymus(2017)
Authors: Greet Verstichel, David Vermijlen, Liesbet Martens, Glenn Goetgeluk, Margreet Brouwer, Nicolas Thiault, Yasmine Van Caeneghem, Stijn De Munter, Karin Weening, Sarah Bonte, et al.
- Myocardial infarction primes autoreactive T cells through activation of dendritic cells(2017)
Authors: Katrien Van Der Borght, Charlotte Scott, Veronika Nindl, Ann Bouché, Liesbet Martens, Dorine Sichien, Justine Van Moorleghem, Manon Vanheerswynghels, Sofie De Prijck, Yvan Saeys, et al.
Pages: 3005 - 3017 - Distributed incremental fingerprint identification with reduced database penetration rate using a hierarchical classification based on feature fusion and selection(2017)
Authors: Daniel Peralta Cámara, Isaac Triguero, Salvador García, Yvan Saeys, Jose M Benitez, Francisco Herrera
Pages: 91 - 103 - Netter: re-ranking gene network inference predictions using structural network properties(2016)
Authors: Joeri Ruyssinck, Piet Demeester, Tom Dhaene, Yvan Saeys
- Unbiased modelling of dynamic processes with single-cell RNA-sequencing(2016)
Authors: Wouter Saelens, Yvan Saeys
Number of pages: 1 - Bayesian deconvolution of scanning electron microscopy images using point-spread function estimation and non-local regularization(2016)
Authors: Joris Roels, Jan Aelterman, Jonas De Vylder, Hiep Luong, Yvan Saeys, Wilfried Philips
Pages: 443 - 447 - IRF8 transcription factor controls survival and function of terminally differentiated conventional and plasmacytoid dendritic cells, respectively(2016)
Authors: Dorine Sichien, Charlotte Scott, Liesbet Martens, Matthias Vanderkerken, Sofie Van Gassen, Maud Plantinga, Thorsten Joeris, Sofie De Prijck, Leen Vanhoutte, Manon Vanheerswynghels, et al.
Pages: 626 - 640 - Efficient analysis of mouse genome sequences reveal many nonsense variants(2016)
Authors: Sophie Steeland, Steven Timmermans, Sara Van Ryckeghem, Yvan Saeys, Marc Van Montagu, Claude Libert
Pages: 5670 - 5675 - The checkpoint for agonist selection precedes conventional selection in human thymus(2016)Volume: 128
Authors: Greet Verstichel, David Vermijlen, Liesbet Martens, Glenn Goetgeluk, Yvan Saeys, Hilde Cheroutre
Number of pages: 1 - Machine learning challenges for single cell data(2016)Volume: 9853
Authors: Sofie Van Gassen, Tom Dhaene, Yvan Saeys, B Berendt, B Bringmann, E Fromont, G Garriga, P Miettinen, N Tatti, V Tresp
Pages: 275 - 279