Researcher
Pieter Mestdagh
- Disciplines:Analysis of next-generation sequence data, Cancer diagnosis, Cancer therapy , Molecular diagnostics, Development of bioinformatics software, tools and databases, Computational transcriptomics and epigenomics, Bioinformatics of disease, Bioinformatics data integration and network biology, Cancer biology, Transcription and translation, Epigenetics, Genome structure and regulation, Genetics
Affiliations
- Department of Biomolecular Medicine (Department)
Member
From1 Oct 2018 → Today - Department of Pediatrics and medical genetics (Department)
Member
From1 Oct 2006 → 30 Sep 2018
Projects
1 - 10 of 25
- A patient derived xenograft (PDX) platform for in vivo evaluation of novel anticancer therapiesFrom1 May 2022 → TodayFunding: FWO Medium Size Research Infrastructure
- Unraveling the characteristics of functional long non-coding RNAs using serial cellular and molecular phenotypingFrom1 Jan 2022 → TodayFunding: FWO research project
- Implementation of a longitudinal multi-omics prediction model for response to immune checkpoint inhibitionFrom1 Oct 2021 → 28 Feb 2022Funding: BOF - postdoctoral mandates
- Cancer-specific circulating RNAs as biomarkers for diagnosis and therapy response monitoringFrom1 Nov 2020 → TodayFunding: FWO fellowships
- Strategies against persistent HIV-1 reservoirsFrom1 Jan 2020 → TodayFunding: FWO Strategic Basic Research (SBO)
- The role of super-enhancer regulated SOX11 in regulation of SWI/SNF and PRC2 activity in adrenergic neuroblastomaFrom1 Nov 2019 → TodayFunding: FWO fellowships
- Cancer-specific circulating RNAs as biomarkers for diagnosis and therapy response monitoring.From1 Oct 2019 → 31 Oct 2020Funding: BOF - doctoral mandates
- individualizedPaediatricCure: Cloud-based virtual-patient models for precision paediatric onocologyFrom1 Jan 2019 → TodayFunding: H2020 - Health, demographic change and wellbeing
- RNA-MAGIC: RNA-based bioMArkers and tarGets In asthma and Chronic Obstructive Pulmonary Disease (COPD)From1 Jan 2019 → TodayFunding: BOF - projects
- Long non-coding RNAs in HIV latency: a new approach for improved latency reversal in shock-and-kill cure strategies.From1 Jan 2019 → TodayFunding: FWO Strategic Basic Research Grant
Publications
1 - 10 of 227
- Transient nuclear lamin A/C accretion aids in recovery from vapor nanobubble-induced permeabilisation of the plasma membrane(2022)
Authors: Gaëlle Houthaeve, Gerardo García-Díaz Barriga, Stephan Stremersch, Herlinde De Keersmaecker, Juan Carlos Fraire, Joke Vandesompele, Pieter Mestdagh, Stefaan De Smedt, Kevin Braeckmans, Winnok De Vos
Number of pages: 1 - Open problems in extracellular RNA data analysis : insights from an ERCC online workshop(2022)
Authors: Roger P. Alexander, Robert R. Kitchen, Juan Pablo Tosar, Matthew Roth, Pieter Mestdagh, Klaas E. A. Max, Joel Rozowsky, Karolina Elzbieta Kaczor-Urbanowicz, Justin Chang, Leonora Balaj, et al.
Number of pages: 1 - Orthogonal proteomics methods to unravel the HOTAIR interactome(2022)
Authors: Louis Delhaye, Edith De Bruycker, Pieter-Jan Volders, Daria Fijalkowska, Delphine De Sutter, Sven Degroeve, Lennart Martens, Pieter Mestdagh, Sven Eyckerman
Number of pages: 1 - Reliable and scalable SARS-CoV-2 qPCR testing at a high sample throughput : lessons learned from the Belgian initiative(2022)
Authors: Steven Van Vooren, James Grayson, Marc Van Ranst, Elisabeth Dequeker, Lies Laenen, Reile Janssen, Laurent Gillet, Fabrice Bureau, Wouter Coppieters, Nathalie Devos, et al.
Number of pages: 1 - CiLiQuant : quantification of RNA junction reads based on their circular or linear transcript origin(2022)
Authors: Annelien Morlion, Eva Hulstaert, Marieke Vromman, Jasper Anckaert, Celine Everaert, Joke Vandesompele, Pieter Mestdagh
Number of pages: 1 - RNA biomarkers from proximal liquid biopsy for diagnosis of ovarian cancer(2022)
Authors: Eva Hulstaert, Keren Levanon, Annelien Morlion, Stefan Van Aelst, Anthony-Alexander Christidis, Ruben Zamar, Jasper Anckaert, Kimberly Verniers, Keren Bahar-Shany, Stav Sapoznik, et al.
Pages: 155 - 164 - Unlocking the secrets of long non-coding RNAs in asthma(2022)
Authors: Fien Gysens, Pieter Mestdagh, Eric de Bony de Lavergne, Tania Maes
Pages: 514 - 522 - Recurrent chromosomal imbalances provide selective advantage to human embryonic stem cells under enhanced replicative stress conditions(2021)
Authors: Liselot Mus, Stéphane Van Haver, Mina Popovic, Wim Trypsteen, Steve Lefever, Nadja Zeltner, Yudelca Ogando, Eva Jacobs, Geertrui Denecker, Ellen Sanders, et al.
Pages: 272 - 281 - Messenger RNA capture sequencing of extracellular RNA from human biofluids using a comprehensive set of spike-in controls(2021)
Authors: Eva Hulstaert, Anneleen Decock, Annelien Morlion, Celine Everaert, Kimberly Verniers, Justine Nuytens, Nele Nijs, Gary P. Schroth, Scott Kuersten, Stephen M. Gross, et al.
Number of pages: 1 - Evaluating diagnostic accuracy of saliva sampling methods for severe acute respiratory syndrome coronavirus 2 reveals differential sensitivity and association with viral load(2021)
Authors: Pieter Mestdagh, Michel Gillard, Sharonjit K. Dhillon, Jean-Paul Pirnay, Jeroen Poels, Jan Hellemans, Veronik Hutse, Celine Vermeiren, Maxime Boutier, Veerle De Wever, et al.
Pages: 1249 - 1258