Researcher
Petra Van Damme
- Keywords:proteomics, bacterial pathogen, riboproteogenomics, proteoforms, host-microbe interaction, genome (re-)annotation, (alternative) translation initiation
- Disciplines:Transcription and translation, Proteomics, Transcriptomics, Interactomics, Infectious diseases
Affiliations
- Department of Biochemistry and microbiology (Department)
Member
From1 Mar 2019 → Today - Department of Biomolecular Medicine (Department)
Member
From1 Oct 2018 → 28 Feb 2019 - Department of Plant Biotechnology and Bioinformatics (Department)
Member
From1 May 2018 → 30 Sep 2018 - Department of Biochemistry (Department)
Member
From1 Oct 2004 → 30 Sep 2018
Projects
1 - 10 of 10 results
- Protein interplay during the establishment of arbuscular mycorrhiza: revealing the function of tomato root proteins interacting with fungal plant effectorsFrom1 Oct 2019 → TodayFunding: FWO fellowships
- Proteogenomic-assisted exploration of the molecular mechanisms underlying Salmonella infectionFrom1 Oct 2019 → TodayFunding: BOF - Doctoral projects (pro memore - non-attributable)
- Riboproteogenomics in aid of bacterial pathogen/host interaction studiesFrom15 Apr 2019 → TodayFunding: BOF - Doctoral projects (pro memore - non-attributable)
- Mapping the tomato protein network exploited by type III effectors involved in bacterial wiltFrom1 Jan 2019 → TodayFunding: FWO Strategic Basic Research Grant
- Translational control in infection biology: the role of sORFs in Salmonella pathogenesis. From1 Oct 2016 → 30 Sep 2019Funding: FWO fellowships
- The study of N-terminal protein variants, their stability and localization by means of ribosome profiling and positional proteomicsFrom1 Jan 2014 → 31 Dec 2016Funding: FWO research project
- W&T scholarship Elena SperanskayaFrom1 Jun 2013 → 31 Jan 2015Funding: Geopolitical funding in general (R&D collaboration with Central and Eastern Europe
- Complementary use of ribosome profiling and positional proteomics for mapping the translation initiation and nascent protein modification landscape in human cell linesFrom1 Jan 2013 → 31 Dec 2018Funding: FWO research project
- Development of C-terminal peptide-based proteome-analytical strategies and the extensive mapping of the granzyme substrate-repertoireFrom1 Jan 2010 → 31 Dec 2012Funding: FWO research grant KAN
- Granzyme-mediated cell-targeted and antiviral methods-of-action: a targeted proteomic analysisFrom1 Oct 2008 → 30 Sep 2014Funding: FWO fellowships, BOF - Other initiatives (pro memore - non-attributable)
Publications
1 - 10 of 77 results
- (2019)Journal: JOURNAL OF BIOLOGICAL CHEMISTRYISSN: 1083-351XIssue: 18Volume: 294
Authors: Jianling Xie, Petra Van Damme, Danielle Fang, Christopher G. Proud
Pages: 7169 - 7176 - (2018)Journal: Molecular & Cellular ProteomicsISSN: 1535-9476Issue: 12Volume: 17
Authors: Sylvia Varland, Henriette Aksnes, Fedor Kryuchkov, Francis Impens, Delphi Van Haver, Veronique Jonckheere, Mathias Ziegler, Kris Gevaert, Petra Van Damme, Thomas Arnesen
Pages: 2308 - 2323 - (2018)Journal: CELLISSN: 1097-4172Issue: 5Volume: 172
Authors: Carla G Silva, Elise Peyre, Mohit H Adhikari, Sylvia Tielens, Sebastian Tanco, Petra Van Damme, Lorenza Magno, Nathalie Krusy, Gulistan Agirman, Maria M Magiera, et al.
Pages: 1063 - 1078 - (2018)Journal: INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGYISSN: 1878-5875Volume: 95
Authors: Sara Alves, Leire Neiri, Susana Rodrigues Chaves, Selma Vieira, Dário Trindade, Stephen Manon, Veronica Dominguez, Belen Pintado, Veronique Jonckheere, Petra Van Damme, et al.
Pages: 35 - 42 - (2018)Journal: NatureISSN: 0028-0836Issue: 7688Volume: 553
Authors: Petra Van Damme
Pages: 289 - 290 - (2018)Journal: MOLECULAR & CELLULAR PROTEOMICSISSN: 1535-9484Issue: 4Volume: 17
Authors: Veronique Jonckheere, Daria Fijalkowska, Petra Van Damme
Pages: 694 - 708 - (2017)Journal: Molecular & Cellular ProteomicsISSN: 1535-9476Issue: 6Volume: 16
Authors: Patrick Willems, Elvis Ndah, Veronique Jonckheere, Simon Stael, Adriaan Sticker, Lennart Martens, Frank Van Breusegem, Kris Gevaert, Petra Van Damme
Pages: 1064 - 1080 - (2017)Book: Protein terminal profiling : methods and protocolsSeries: Methods in Molecular Biology
Authors: An Staes, Petra Van Damme, Evy Timmerman, Bart Ruttens, Elisabeth Stes, Kris Gevaert, Francis Impens, Oliver Schilling
Pages: 51 - 76 - (2017)Book: Protein terminal profiling : methods and protocolsSeries: Methods in Molecular Biology
Authors: Sebastian Tanco, Francesc Xavier Aviles, Kris Gevaert, Julia Lorenzo, Petra Van Damme, Oliver Schilling
Pages: 115 - 133 - (2017)Journal: Nucleic Acids ResearchISSN: 0305-1048Issue: 13Volume: 45
Authors: Daria Fijalkowska, Steven Verbruggen, Elvis Ndah, Veronique Jonckheere, Gerben Menschaert, Petra Van Damme
Pages: 7997 - 8013