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Researcher
Guy Baele
- Disciplines:Microbiology, Systems biology, Laboratory medicine
Affiliations
- Department of Microbiology, Immunology and Transplantation (Department)
Member
From1 Oct 2016 → 31 Dec 2016 - Laboratory of Clinical and Epidemiological Virology (Rega Institute) (Division)
Member
From1 Feb 2011 → 30 Sep 2022
Projects
1 - 10 of 14
- Integrating Multi-Disciplinary Expertise in a Learning and Adaptive European Pandemic Preparedness SystemFrom1 Oct 2023 → TodayFunding: HORIZON.2.1 - Health
- Phylogenetic tree space exploration in online Bayesian phylodynamic inferenceFrom1 Jun 2023 → TodayFunding: Own budget, for example: patrimony, inscription fees, gifts
- Application and visualisation design for Bayesian phylodynamic inferenceFrom1 Dec 2021 → TodayFunding: Own budget, for example: patrimony, inscription fees, gifts
- Integrating spatial heterogeneity with temporal and demographic inferences, with an application to combating human rabiesFrom1 Jan 2021 → TodayFunding: FWO research project (including WEAVE projects)
- Inter- and intra-community dynamics of SARS-CoV-2 spread by whole-genome sequencing and phylodynamic analysisFrom1 Nov 2020 → 31 Oct 2021Funding: FWO thematic call for applied research
- Methods and Applications for Bayesian Phylodynamic InferenceFrom1 Aug 2020 → 6 Dec 2021Funding: Own budget, for example: patrimony, inscription fees, gifts
- Phylodynamics for time-sensitive viral dataFrom24 Feb 2020 → 24 Feb 2024Funding: Own budget, for example: patrimony, inscription fees, gifts
- Statistical and computational approaches to enable real-time phylodynamic inferenceFrom1 Jan 2020 → 31 Dec 2023Funding: FWO research project (including WEAVE projects)
- Statistical and computational approaches to enable real-time phylodynamic inferenceFrom1 Oct 2018 → 30 Sep 2023Funding: BOF - Concerted Research Project from 1994
- Structured coalescent models for accurate Bayesian phylodynamic inferenceFrom1 Oct 2018 → 31 Oct 2023Funding: FWO Strategic Basic Research Grant
Publications
71 - 80 of 139
- Bayesian Evaluation of Temporal Signal in Measurably Evolving Populations(2020)
Authors: Philippe Lemey, Guy Baele
Pages: 3363 - 3379 - Accommodating individual travel history and unsampled diversity in Bayesian phylogeographic inference of SARS-CoV-2(2020)
Authors: Philippe Lemey, Sam Hong, Guy Baele
- Gradients Do Grow on Trees: A Linear-Time O(N)-Dimensional Gradient for Statistical Phylogenetics(2020)
Authors: Guy Baele, Philippe Lemey
Pages: 3047 - 3060 - Genomic Epidemiology, Evolution, and Transmission Dynamics of Porcine Deltacoronavirus(2020)
Authors: Simon Dellicour, Guy Baele, Philippe Lemey
Pages: 2641 - 2654 - Radiation of the coralline red algae (Corallinophycidae, Rhodophyta) crown group as inferred from a multilocus time-calibrated phylogeny(2020)
Authors: Guy Baele
- Temporal signal and the phylodynamic threshold of SARS-CoV-2(2020)
Authors: Philippe Lemey, Guy Baele
- Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable(2020)
Authors: Anne-Mieke Vandamme, Simon Dellicour, Guy Baele, Philippe Lemey
Pages: 12522 - 12523 - Online Bayesian Phylodynamic Inference in BEAST with Application to Epidemic Reconstruction(2020)
Authors: Philippe Lemey, Guy Baele
Pages: 1832 - 1842 - nosoi: A stochastic agent-based transmission chain simulation framework in r(2020)
Authors: Simon Dellicour, Philippe Lemey, Guy Baele
Pages: 1002 - 1007 - Pliocene colonization of the Mediterranean by Great White Shark inferred from fossil records, historical jaws, phylogeographic and divergence time analyses(2020)
Authors: Guy Baele
Pages: 1119 - 1129