Researcher
Francisco Avila Cobos
- Keywords:non-coding RNA, Computational deconvolution, biostatistics, Transcriptomics, liquid biopsy, Data Mining, Bioinformatics
- Disciplines:Computational transcriptomics and epigenomics
Affiliations
- Department of Biomolecular Medicine (Department)
Member
From1 Oct 2018 → 31 Dec 2023 - Department of Pediatrics and medical genetics (Department)
Member
From1 Oct 2014 → 30 Sep 2018
Projects
1 - 2 of 2
- Implementation of a longitudinal multi-omics prediction model for response to immune checkpoint inhibitionFrom1 Oct 2021 → 28 Feb 2022Funding: BOF - postdoctoral mandates
- Development of a data-mining pipeline for drug target identification from circulating transcriptomes of lung cancer patientsFrom1 Jan 2017 → 15 Feb 2020Funding: BOF - Doctoral projects
Publications
1 - 10 of 40
- Performance evaluation of RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study(2023)
Authors: Anneleen Decock, Olivier De Wever, Celine Everaert, Hetty Helsmoortel, An Hendrix, Pieter Mestdagh, Annelien Morlion, Jo Vandesompele, Ruben Van Paemel, Francisco Avila Cobos, et al.
Number of pages: 1 - Performance evaluation of RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study(2023)
Authors: Anneleen Decock, Olivier De Wever, Celine Everaert, Hetty Helsmoortel, An Hendrix, Pieter Mestdagh, Annelien Morlion, Jo Vandesompele, Ruben Van Paemel, Francisco Avila Cobos, et al.
Number of pages: 1 - Dramatic impact of blood collection tube and RNA purification method on extracellular RNA transcriptomes(2023)
Authors: Jasper Anckaert, Francisco Avila Cobos, Anneleen Decock, Philippe Decruyenaere, Jill Deleu, Katleen De Preter, Olivier De Wever, Jilke De Wilde, Bert Dhondt, Thibaut D'huyvetter, et al.
Number of pages: 1 - Substantial performance differences among RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study(2021)
Authors: Anneleen Decock, Olivier De Wever, Celine Everaert, Hetty Helsmoortel, An Hendrix, Pieter Mestdagh, Annelien Morlion, Jo Vandesompele, Ruben Van Paemel, Francisco Avila Cobos, et al.
Number of pages: 1 - Robust sequential biophysical fractionation of blood plasma to study variations in the biomolecular landscape of systemically circulating extracellular vesicles across clinical conditions(2021)
Authors: Glenn Vergauwen, Joeri Tulkens, Francisco Avila Cobos, Marie-Angélique De Scheerder, Ilkka Miinalainen, Pieter Mestdagh, Hannelore Denys, An Hendrix
- DECONbench : a benchmarking platform dedicated to deconvolution methods for tumor heterogeneity quantification(2021)
Authors: Clémentine Decamps, Alexis Arnaud, Florent Petitprez, Mira Ayadi, Aurélia Baurès, Lucile Armenoult, N. Alcala, A. Arnaud, Francisco Avila Cobos, Luciana Batista, et al.
- The RNA Atlas expands the catalog of human non-coding RNAs (June, 10.1038/s41587-021-00936-1, 2021)(2021)
Authors: Lucia Lorenzi, Hua-Sheng Chiu, Francisco Avila Cobos, Stephen Gross, Justine Nuytens, Katrien Vanderheyden, Aidan Tay, Eric J. de Bony, Fien Gysens, Marieke Vromman, et al.
Pages: 1467 - 1467 - Substantial performance differences among RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study(2021)
Authors: Anneleen Decock, Olivier De Wever, Celine Everaert, Hetty Helsmoortel, An Hendrix, Pieter Mestdagh, Annelien Morlion, Jo Vandesompele, Ruben Van Paemel, Francisco Avila Cobos, et al.
Number of pages: 1 - The RNA Atlas expands the catalog of human non-coding RNAs(2021)
Authors: Lucia Lorenzi, Hua-Sheng Chiu, Francisco Avila Cobos, Stephen Gross, Pieter-Jan Volders, Robrecht Cannoodt, Justine Nuytens, Katrien Vanderheyden, Jasper Anckaert, Steve Lefever, et al.
Pages: 1453 - 1465 - Substantial performance differences among RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control study-important considerations for liquid biopsies(2020)Volume: 26
Authors: Anneleen Decock, Jasper Anckaert, Celine Everaert, Justine Nuytens, Scott Kuersten, An Hendrix, Jo Vandesompele, Pieter Mestdagh, Bert Dhondt, Ruben Van Paemel, et al.
Pages: 93 - 94