Researcher
Filip Van Nieuwerburgh
- Keywords:Massively parallel sequencing, Applied bioinformatics
- Disciplines:Pharmogenetics and -genomics, Genetics, Epigenetics, Immunogenetics
Affiliations
- Department of Pharmaceutics (Department)
Member
From1 Sep 1999 → Today
Infrastructure
1 - 2 of 2
Projects
1 - 10 of 28
- Democratizing High-Throughput Next Generation Sequencing across different Life Science Fields: the AVITI Next Generation Sequencer.From1 May 2024 → TodayFunding: FWO Medium Size Research Infrastructure
- Unraveling the role of the immune system in the development of exuberant granulation tissue in horse woundsFrom1 Jan 2024 → TodayFunding: BOF - doctoral mandates
- Strategic Innovations in Molecular GeneticsFrom1 Jan 2024 → TodayFunding: BOF - projects
- Extracellular vesicles from follicular fluid are key for successful development of fresh and vitrified equine oocytesFrom16 Oct 2023 → TodayFunding: BOF - postdoctoral mandates
- qPCR system for NGS library quality control, gene expression measurement, hybridization curve, and melting curve analysisFrom15 Dec 2022 → TodayFunding: BOF - scientific equipment program
- Cofunding core facility - Ghent Light Microscopy (GLiM)From1 Jul 2022 → TodayFunding: BOF - research organisations
- Cofunding core facility - UGent NGS CoreFrom1 Jul 2022 → TodayFunding: BOF - research organisations
- Modular high-end mass spectrometer for ultrasensitive quantification and imaging of small organic molecules in cross-health research - MSsmall-XHFrom1 May 2022 → TodayFunding: FWO Medium Size Research Infrastructure
- Empirical exploration of novel DNA probes for hybridization to tandem repeatsFrom1 Nov 2021 → TodayFunding: FWO Strategic Basic Research Grant
- Nanopore sequencing of complete pharmacogenes after CRISPR/Cas9 enrichment in tamoxifen and clopidogrel patients allowing enhanced haplotyping and continuous scale machine learning efficacy prediction.From1 Oct 2021 → TodayFunding: BOF - doctoral mandates
Publications
1 - 10 of 288
- Applications of nanopore sequencing for forensic analysis(2024)
Authors: Olivier Tytgat, Filip Van Nieuwerburgh
Pages: 85 - 98 - Genome-wide methylome stability and parental effects in the worldwide distributed Lombardy poplar(2024)
Authors: An Vanden Broeck, Tim Meese, Pieter Verschelde, Karen Cox, Berthold Heinze, Dieter Deforce, Ellen De Meester, Filip Van Nieuwerburgh
- Proteomics data in vitiligo : a scoping review(2024)
Authors: Danique Berrevoet, Filip Van Nieuwerburgh, Dieter Deforce, Reinhart Speeckaert
- An in-depth investigation of the microbiota and its virulence factors associated with severe udder cleft dermatitis lesions(2024)
Authors: Anne-Sofie Vermeersch, M. Ali, Yannick Gansemans, Filip Van Nieuwerburgh, Richard Ducatelle, Peter Geldhof, Dieter Deforce, J. Callens, Geert Opsomer
Pages: 3219 - 3234 - Mycothione reductase as a potential target in the fight against Mycobacterium abscessus infections(2024)
Authors: T. Piller, L. De Vooght, Yannick Gansemans, Filip Van Nieuwerburgh, P. Cos
- Baselining physiological parameters in three muscles across three equine breeds : what can we learn from the horse?(2024)
Authors: Carmen Vidal Moreno de Vega, Constance De meeûs, Berit Boshuizen, Lorie De Maré, Yannick Gansemans, Filip Van Nieuwerburgh, Dieter Deforce, Klara Goethals, Ward De Spiegelaere, Luc Leybaert, et al.
- Osteopontin characterizes bile duct-associated macrophages and correlates with liver fibrosis severity in primary sclerosing cholangitis(2024)
Authors: Kevin De Muynck, Lander Heyerick, Federico Francesco De Ponti, Bart Vanderborght, Tim Meese, Sanne Van Campenhout, Leen Baudonck, Eva Gijbels, Pedro M. Rodrigues, Jesus M. Banales, et al.
Pages: 269 - 288 - Targeted haplotyping in pharmacogenomics using Oxford Nanopore Technologies' adaptive sampling(2023)
Authors: Koen Deserranno, Laurentijn Tilleman, Kaat Rubben, Dieter Deforce, Filip Van Nieuwerburgh
- New insights into the combined toxicity of aflatoxin B1 and fumonisin B1 in HepG2 cells using Seahorse respirometry analysis and RNA transcriptome sequencing(2023)
Authors: Xiangrong Chen, Mohamed Fathi Abdallah Abdelmohsen, Charlotte Grootaert, Filip Van Nieuwerburgh, Andreja Rajkovic
- Comparative transcriptomics of porcine liver-resident CD8αdim, liver CD8αhigh and circulating blood CD8αhigh NK cells reveals an intermediate phenotype of liver CD8αhigh NK cells(2023)
Authors: Leen Hermans, Sofie Denaeghel, Robert J. J. Jansens, Steffi De Pelsmaeker, Filip Van Nieuwerburgh, Dieter Deforce, Everardo Hegewisch-Solloa, Emily M. Mace, Eric Cox, Bert Devriendt, et al.
Patents
1 - 2 of 2
- Hydrolysis-based probe and method for STR genotyping (Inventor)
- Probe and method for STR-genotyping (Inventor)