Researcher
Filip Van Nieuwerburgh
- Keywords:Massively parallel sequencing, Applied bioinformatics
- Disciplines:Pharmogenetics and -genomics, Genetics, Epigenetics, Immunogenetics
Affiliations
- Department of Pharmaceutics (Department)
Member
From1 Sep 1999 → Today
Projects
1 - 10 of 19
- Modular high-end mass spectrometer for ultrasensitive quantification and imaging of small organic molecules in cross-health research - MSsmall-XHFrom1 May 2022 → TodayFunding: FWO Medium Size Research Infrastructure
- Nanopore sequencing of complete pharmacogenes after CRISPR/Cas9 enrichment in tamoxifen and clopidogrel patients allowing enhanced haplotyping and continuous scale machine learning efficacy prediction.From1 Oct 2021 → TodayFunding: BOF - doctoral mandates
- PEA histone modification proteomicsFrom1 Mar 2021 → TodayFunding: IOF - technology validation in lab
- Stimulated emission depletion microscopy (STED): Nanoscopy for innovative research in the life sciencesFrom1 May 2020 → TodayFunding: FWO Medium Size Research Infrastructure
- Covid-Track: applying quantitative virology and single-cell genomics to unravel the virus-host interactions leading to severe immunopathologies in COVID-19 patientsFrom15 Apr 2020 → 14 Apr 2021Funding: BOF - projects
- Identification of adaptive mechanisms leading to reduced antibiotic susceptibility in bacterial biofilms using experimental evolution and machine learning approachesFrom1 Jan 2020 → TodayFunding: BOF - projects
- Characterization of extracellular RNA-signals and their role in antiviral immunity in insectsFrom1 Jan 2019 → TodayFunding: FWO research project
- Lab-on-a-Chip (LoC) for forensic STR profiling.From1 Oct 2018 → TodayFunding: BOF - Doctoral projects
- PromethION: nanopore sequencer for high-throughput and long read high-fidelity DNA and RNA sequencing allowing fast decoding of (epi)genomes and (epi)transcriptomesFrom1 Jun 2018 → 31 May 2020Funding: BOF - Other initiatives
- Fetal cell isolation and characterization for cell-based non-invasive prenatal genetic diagnosisFrom1 Oct 2017 → 30 Sep 2021Funding: BOF - Doctoral projects
Publications
1 - 10 of 222
- Metabolism and health effects of rare sugars in a CACO-2/HepG2 coculture model(2022)
Authors: Amar Daniël Emanuel Van Laar, Charlotte Grootaert, Filip Van Nieuwerburgh, Dieter Deforce, Tom Desmet, Koen Beerens, John Van Camp
Number of pages: 1 - Hatching is modulated by microRNA-378a-3p derived from extracellular vesicles secreted by blastocysts(2022)
Authors: Krishna Chaitanya Pavani, Tim Meese, Osvaldo Américo Bogado Pascottini, XueFeng Guan, Xiaoyuan Lin, Luc Peelman, Joachim Hamacher, Filip Van Nieuwerburgh, Dieter Deforce, Annekatrien Boel, et al.
Number of pages: 1 - Profiling the aerobic window of horses in response to training by means of a modified lactate minimum speed test : flatten the curve(2022)
Authors: Lorie De Maré, Berit Boshuizen, Carmen Vidal Moreno de Vega, Constance De meeûs, Lukas Plancke, Yannick Gansemans, Filip Van Nieuwerburgh, Dieter Deforce, Jean Eduardo de Oliveira, Guilherme Hosotani, et al.
Number of pages: 1 - Lycopene supplementation to serum-free maturation medium improves in vitro bovine embryo development and quality and modulates embryonic transcriptomic profile(2022)
Authors: Shehu Sidi, Osvaldo Américo Bogado Pascottini, Daniel Angel Velez, Nima AzariDolatabad, Krishna Chaitanya Pavani, . Gretania Residiwati, Tim Meese, Filip Van Nieuwerburgh, Elias Kambai Bawa, Ambrose Alikidon Voh, et al.
Number of pages: 1 - Nanopore sequencing of a forensic combined STR and SNP multiplex(2022)
Authors: Olivier Tytgat, Sonja Skevin, Dieter Deforce, Filip Van Nieuwerburgh
Number of pages: 1 - Metallothioneins alter macrophage phenotype and represent novel therapeutic targets for acetaminophen-induced liver injury(2022)
Authors: Lindsey Devisscher, Sanne Van Campenhout, Sander Lefere, Sarah Raevens, Laurentijn Tilleman, Filip Van Nieuwerburgh, Hannelore P. Van Eeckhoutte, Anne Hoorens, Michael A. Lynes, Anja Geerts, et al.
Pages: 123 - 133 - Transcriptional dynamics of gametogenesis in the green seaweed Ulva mutabilis identifies an RWP-RK transcription factor linked to reproduction(2022)
Authors: Xiaojie Liu, Jonas Blomme, Kenny Bogaert, Sofie D'hondt, Thomas Wichard, Dieter Deforce, Filip Van Nieuwerburgh, Olivier De Clerck
Number of pages: 1 - Characterization of the inflammatory microenvironment and hepatic macrophage subsets in experimental hepatocellular carcinoma models(2021)
Authors: Helena Degroote, Sander Lefere, Astrid Vandierendonck, Bart Vanderborght, Tim Meese, Filip Van Nieuwerburgh, Xavier Verhelst, Anja Geerts, Hans Van Vlierberghe, Lindsey Devisscher
Pages: 562 - 577 - Activin A-derived human embryonic stem cells show increased competence to differentiate into primordial germ cell-like cells(2021)
Authors: Swati Mishra, Jasin Taelman, Mina Popovic, Laurentijn Tilleman, Evi Duthoo, Margot Van der Jeught, Dieter Deforce, Filip Van Nieuwerburgh, Björn Menten, Petra De Sutter, et al.
Pages: 551 - 563 - Recurrent chromosomal imbalances provide selective advantage to human embryonic stem cells under enhanced replicative stress conditions(2021)
Authors: Liselot Mus, Stéphane Van Haver, Mina Popovic, Wim Trypsteen, Steve Lefever, Nadja Zeltner, Yudelca Ogando, Eva Jacobs, Geertrui Denecker, Ellen Sanders, et al.
Pages: 272 - 281