Researcher
Kevin Vanneste
- Disciplines:Public health services, Bioinformatics and computational biology, Public health care, Scientific computing, Biomechanical engineering, Industrial biotechnology, Biomaterials engineering, Environmental engineering and biotechnology, Biological system engineering, Other biotechnology, bio-engineering and biosystem engineering, Other (bio)medical engineering, Plant biology
Affiliations
- Department of Plant Biotechnology and Bioinformatics (Department)
Member
From1 Oct 2009 → 31 Jan 2015
Projects
1 - 1 of 1
- Testing big evolutionary hypotheses with small organismsFrom1 Oct 2014 → 30 Sep 2017Funding: BOF - Other initiatives
Publications
1 - 10 of 26
- Transforming Shiga toxin-producing Escherichia coli surveillance through whole genome sequencing in food safety practices(2023)
Authors: Stéphanie Nouws, Bavo Verhaegen, Sarah Denayer, Florence Crombé, Denis Piérard, Bert Bogaerts, Kevin Vanneste, Kathleen Marchal, Nancy H. C. Roosens, Sigrid C. J. De Keersmaecker
- Case report : multidrug resistant Raoultella ornithinolytica in a septicemic calf(2021)
Authors: Mathilde Pas, Kevin Vanneste, Jade Bokma, Laura Van Driessche, Sigrid C. J. De Keersmaecker, Nancy H. Roosens, Freddy Haesebrouck, Filip Boyen, Bart Pardon
- Whole-genome sequencing-based antimicrobial resistance characterization and phylogenomic investigation of 19 multidrug-resistant and extended-spectrum beta-lactamase-positive escherichia coli strains collected from hospital patients in Benin in 2019(2021)
Authors: Carine Laurence Yehouenou, Bert Bogaerts, Sigrid C. J. De Keersmaecker, Nancy H. C. Roosens, Kathleen Marchal, Edmond Tchiakpe, Dissou Affolabi, Anne Simon, Francis Moise Dossou, Kevin Vanneste, et al.
- Whole genome sequencing provides an added value to the investigation of staphylococcal food poisoning outbreaks(2021)
Authors: Stéphanie Nouws, Bert Bogaerts, Bavo Verhaegen, Sarah Denayer, Lasse Laeremans, Kathleen Marchal, Nancy H. C. Roosens, Kevin Vanneste, Sigrid C. J. De Keersmaecker
- Application of a strain- level shotgun metagenomics approach on food samples : resolution of the source of a Salmonella food-borne outbreak(2021)
Authors: Florence Buytaers, Assia Saltykova, Wesley Mattheus, Valeska Laisnez, Bavo Verhaegen, Nancy H. C. Roosens, Kevin Vanneste, Naiima Hammami, Brigitte Pochet, Vera Cantaert, et al.
- Towards real-time and affordable strain-level metagenomics-based foodborne outbreak investigations using Oxford nanopore sequencing technologies(2021)
Authors: Florence Buytaers, Assia Saltykova, Sarah Denayer, Bavo Verhaegen, Kevin Vanneste, Nancy H. C. Roosens, Denis Pierard, Kathleen Marchal, Sigrid C. J. De Keersmaecker
- Evaluation of WGS performance for bacterial pathogen characterization with the Illumina technology optimized for time-critical situations(2021)
Authors: Bert Bogaerts, Raf Winand, Julien Van Braekel, Stefan Hoffman, Nancy H. C. Roosens, Sigrid C. J. De Keersmaecker, Kathleen Marchal, Kevin Vanneste
- First detection of a plasmid located carbapenem resistant bla(VIM-1) gene in E. coli isolated from meat products at retail in Belgium in 2015(2020)
Authors: Cristina Garcia-Graells, Bas Berbers, Bavo Verhaegen, Kevin Vanneste, Kathleen Marchal, Nancy H. C. Roosens, Nadine Botteldoorn, Sigrid C. J. De Keersmaecker
- Development of an NGS-based workflow for improved monitoring of circulating plasmids in support of risk assessment of antimicrobial resistance gene dissemination(2020)
Authors: Bas Berbers, Pieter-Jan Ceyssens, Pierre Bogaerts, Kevin Vanneste, Nancy Roosens, Kathleen Marchal, Sigrid C.J. De Keersmaecker
- Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates(2020)
Authors: Stephanie Nouws, Bert Bogaerts, Bavo Verhaegen, Sarah Denayer, Denis Pierard, Kathleen Marchal, Nancy H. C. Roosens, Kevin Vanneste, Sigrid C. J. De Keersmaecker