Researcher
Maarten Dhaenens
- Keywords:Mass Spectrometry, Data-independent acquisition, Histones, pandemic preparedness
- Disciplines:Proteins, Computational transcriptomics and epigenomics, Development of bioinformatics software, tools and databases, Structural bioinformatics and computational proteomics, Protein diagnostics
Affiliations
- Department of Pharmaceutics (Department)
Member
From1 Oct 2005 → Today
Projects
1 - 10 of 10
- Cofunding core facility - ProGenTomicsFrom1 Dec 2023 → TodayFunding: BOF - research organisations
- Orchestrating next-generation mobile modular laboratories for pandemic monitoring preparednessFrom1 Oct 2022 → TodayFunding: Horizon Europe - Civil Security for Society
- Pandemic preparedness: developing a multiplexed mass spectrometry assay to screen for pathogens and the induced immune response.From1 Oct 2022 → TodayFunding: FWO junior postdoctoral fellowship
- A new fragment-centric perspective on proteomicsFrom1 May 2022 → TodayFunding: FWO Medium Size Research Infrastructure
- Migration, diet and health of the first permanent settlers of Belgium: inter- and multi-disciplinary perspectivesFrom1 Jan 2022 → TodayFunding: BOF - projects
- Accurate peptide/protein quantification as a quality control and normalization template for biological proteome samples prior to LC-MS/MS using the Big Lunatic microfluidic UV/vis system.From1 Dec 2020 → 30 Nov 2022Funding: BOF - scientific equipment program
- Histone epigenetic profiling in pharmaco- and toxicoepigenetics.From1 Nov 2020 → 31 Oct 2021Funding: BOF - doctoral mandates
- A way out of the reagents shortages: an MS-based diagnostic test focused on corona protein detectionFrom15 Apr 2020 → 14 Jan 2021Funding: BOF - projects
- High throughput MS-based histone PTM screening: Filling a void in pharmacoepigenetics.From1 Nov 2019 → 23 Dec 2023Funding: FWO Strategic Basic Research Grant
- Data Independent Acquisition Mass Spectrometry to Mine Human Stem Cell Histone EpigeneticsFrom1 Oct 2015 → 30 Sep 2021Funding: FWO fellowships
Publications
1 - 10 of 79
- Cathepsin-L secreted by high-quality bovine embryos exerts an embryotrophic effect in vitro(2023)
Authors: Annelies Raes, Eline Wydooghe, Krishna Pavani, Osvaldo Américo Bogado Pascottini, Katleen Van Steendam, Maarten Dhaenens, Sonia Heras, Luc Peelman, Dieter Deforce, Filip Van Nieuwerburgh, et al.
- Micro‐topographies induce epigenetic reprogramming and quiescence in human mesenchymal stem cells(2023)
Authors: Steven Vermeulen, Bart Van Puyvelde, Laura Bengtsson del Barrio, Ruben Almey, Bernard K. van der Veer, Dieter Deforce, Maarten Dhaenens, Jan de Boer
- A large scale mass spectrometry-based histone screening for assessing epigenetic developmental toxicity(2022)
Authors: Sigrid Verhelst, Bart Van Puyvelde, Sander Willems, Simon Daled, Senne Cornelis, Laura Corveleyn, Ewoud Willems, Dieter Deforce, Laura De Clerck, Maarten Dhaenens
- A comprehensive LFQ benchmark dataset on modern day acquisition strategies in proteomics(2022)
Authors: Bart Van Puyvelde, Simon Daled, Sander Willems, Anne Gonzalez de Peredo, Karima Chaoui, Emmanuelle Mouton-Barbosa, David Bouyssié, Kurt Boonen, Christopher J. Hughes, Lee A. Gethings, et al.
- An interactive mass spectrometry atlas of histone posttranslational modifications in T-cell acute leukemia(2022)
Authors: Lien Provez, Bart Van Puyvelde, Laura Corveleyn, Nina Demeulemeester, Sigrid Verhelst, Beatrice Lintermans, Simon Daled, Juliette Roels, Lieven Clement, Lennart Martens, et al.
- Proteomic comparison of three wild-type pseudorabies virus strains and the attenuated bartha strain reveals reduced incorporation of several tegument proteins in bartha virions(2022)
Authors: Jonas Delva, Simon Daled, Cliff Van Waesberghe, Ruben Almey, Robert J. J. Jansens, Dieter Deforce, Maarten Dhaenens, Herman Favoreel, Felicia Goodrum
- Integrated multi-omics reveal polycomb repressive complex 2 restricts human trophoblast induction(2022)
Authors: Dick W. Zijlmans, Irene Talon, Sigrid Verhelst, Adam Bendall, Karlien Van Nerum, Alok Javali, Andrew A. Malcolm, Sam S. F. A. van Knippenberg, Laura Biggins, San Kit To, et al.
Pages: 858 - 871 - Cov²MS : an automated and quantitative matrix-independent assay for mass spectrometric measurement of SARS-CoV-2 nucleocapsid protein(2022)
Authors: Bart Van Puyvelde, Katleen Van Uytfanghe, Laurence Van Oudenhove, Tessa Van Royen, Arne Matthys, Morteza Razavi, Richard Yip, Terry Pearson, Nicolas Drouin, Jan Claereboudt, et al.
Pages: 17379 - 17387 - Add mass spectrometry to the pandemic toolbox(2021)
Authors: Bart Van Puyvelde, Maarten Dhaenens
- Cov-MS : a community-based template assay for mass-spectrometry-based protein detection in SARS-CoV-2 patients(2021)
Authors: Bart Van Puyvelde, Katleen Van Uytfanghe, Olivier Tytgat, Laurence Van Oudenhove, Robbin Bouwmeester, Simon Daled, Sigrid Verhelst, Laura De Clerck, Laura Corveleyn, Sander Willems, et al.
Pages: 750 - 765